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Research articles and reviews:

Christopher M. Glaze and Todd W. Troyer. A Generative Model for Measuring Latent Timing Structure in Motor Sequences.  PLoS ONE (in press), 2012. (PDF)

Collin J. Lobb, Todd W. Troyer, Charles G. Wilson, Carlos A. Paladini. Disinhibition Bursting of Dopaminergic Neurons. Frontiers in Systems Neuroscience, DOI 10.3389/fnsys.2011.00025, May 10, 2011.  (PDF)

G. Bard Ermentrout, Bryce Beverlin 2nd, Todd Troyer, Theoden I. Netoff. The variance of phase-resetting curves. Journal of Computational Neuroscience, 31(2):185-97, 2011. (PDF)

Joanna R. Pressley and Todd W. Troyer. The Dynamics of Integrate-and-Fire: Mean Versus Variance Modulations and Dependence on Baseline Parameters. Neural Computation, 23(5): 1234–1247, 2011. (PDF)

Joanna R. Pressley and Todd W. Troyer. Complementary Responses to Mean and Variance Modulations in the Perfect Integrate-and-Fire Model.  Biological Cybernetics, 101:63-70, 2009. (PDF)

Christopher M. Glaze and Todd W. Troyer. Behavioral Measurements of a Temporally Precise Motor Code for Birdsong.  Journal of Neuroscience, 27(29): 7631-7639, 2007.(PDF) (Supplemental materials)

Todd W. Troyer. Factors Affecting Phase Synchrony in Integrate-and-Fire Oscillators. Journal of Computational Neuroscience. 20(10):191-200, 2006. (PDF)

Ping Du and Todd W. Troyer. A Segmentation Algorithm for Zebra Finch Song at the Note Level. Neurocomputing, 69(10-12): 1375-1379, 2006. (PDF)

Joanna R. Pressley and Todd W. Troyer. Temporal Processing in the Exponential Integrate-and-Fire Model is Nonlinear. Neurocomputing, 69(10-12): 1076-1080, 2006. (PDF)

David. L. Boothe, Avis H. Cohen, and Todd W. Troyer. Temporal Correlations in Stochastic Models of Double Bursting During Locomotion.  Journal of Neurophysiology. 95(3):1556-70, 2006. (PDF)

Christopher M. Glaze and Todd W. Troyer. Temporal Structure in Zebra Finch Song: Implications for Motor Coding.  Journal of Neuroscience, 26(3):991-1005, 2006.(PDF) (Supplemental materials)

Todd W. Troyer, Anton E. Krukowski, and Kenneth D. Miller. LGN input to simple cells and contrast-invariant orientation tuning: An analysis.  Journal of Neurophysiology, 87(6):2741-2752, 2002.  (PDF)

Kenneth D. Miller and Todd W. Troyer. Neural noise can explain expansive, power-law nonlinearities in neural response functions.  Journal of Neurophysiology, 87(2):653-659, 2002.  (PDF)

Todd W. Troyer and Sarah W. Bottjer. Birdsong:  Models and mechanisms.  Current Opinion in Neurobiology, 11(6):721-6, 2001.  (PDF)

Anton E. Krukowski, Todd W. Troyer, and Kenneth D. Miller. A model of visual cortical temporal frequency tuning. Neurocomputing, 38:1379-1383, 2001.

Todd W. Troyer and Allison J. Doupe. An associational model of birdsong sensorimotor learning. I. Efference copy  and the learning of song syllables.   Journal of Neurophysiology, 84(3):1204-1223, 2000.  (PDF)

Todd W. Troyer and Allison J. Doupe. An Associational Model of Birdsong Sensorimotor Learning. II. Temporal hierarchies and the learning of song sequence.   Journal of Neurophysiology, 84(3):1224-1239, 2000. (PDF)

Todd W. Troyer, Anton E. Krukowski, Nicholas J. Priebe, and Kenneth D. Miller.  Contrast-invariant orientation tuning in visual cortex: feedforward tuning and correlation-based intracortical connectivity. Journal of Neuroscience, 18(15): 5908-5927, 1998.  (PDF)

Todd W. Troyer and Kenneth D. Miller.  Physiological gain leads to high ISI variability in a simple model of a cortical regular spiking cell. Neural Computation, 9(5):971-983. 1997. Reprinted in L.F. Abbott and T.J. Sejnowski, editors, Neural Codes and Distributed Representations: Foundations of Neural Computation. MIT Press, pp.187-199, 1999. (PDF)

Todd W. Troyer. Feedforward Hebbian learning with nonlinear output units: a Lyapunov approach.  Neural Networks, 9(2):321-328, 1996. (PDF)

Todd W. Troyer, Jacob E. Levin,  and Gwen A. Jacobs. Construction and analysis of a database representing a neural map.  Microscopy Research and Technique, 29:329-343, 1994.

Todd W. Troyer and Christopher M. Glaze. Pulling an All-nighter. Nature Neuroscience, 12(1):12-13, 2009. (PDF)

Christopher M. Glaze and Todd W. Troyer. Cool Songs.  Nature, 456(7219):187-8, 2008. (PDF)

Todd W. Troyer.  A Mathematician’s Road to Neuroethology. International Society for Neuroethology Newsletter, Nov 2003. (PDF)

Book Chapters

Bill Baird, Todd W. Troyer, and Frank Eeckman.  Attentional network streams of synchronized 40 Hz activity in a cortical architecture of coupled oscillating associative memories.  In D. Levine, V. Brown, and T. Shirley, editors, Oscillations in Neural Systems. Laurence Erlbaum, 2000.