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Publications: (Click on the name below to see publicatons.)

[Bernard Arulanandam, Edwin Barea-Rodriguez, James Chambers, Brenda Claiborne, Waldemar Gorski, Hyansoo Han, Andrew Martinez, George Negrete, Gary Sunter, Brian Derrick, Robert Renthal, Dibyendu Sarkar, Andrew Tsin, Judith Walmsley, Cong-Gui Zhao ,Liao Y Chan, Hai-Chao Han, Luis Haro]

 

Bernard Arnulandum, PH.D  Top

  • Chen, C., Chen, D., Sharma, J., Cheng, W., Zhong, Y., Liu, K., Shain, R., Arulanandam, B., Zhong, G.  The hypothetical protein CT813 is localized in the C. trachomatis inclusion membrane and immunogenic in women urogenitally infected with C. trachomatis. Infect. Immuno. 74:4286-4840., 2006.

  • Murthy, A. K., Cong, Y., Forsthuber, T.G., Zhong, G., Guentzel, M.N., Arulanandam, B.P.  Chlamydial protease-like activity factor induces protective immunity against genital chlamydial infection in transgenic mice that express the human HLA-DR4 allele.  Infect. Immuno. 74:6722-6729, 2006.

  • Murphey, C., Murthy, A.K., Meier P.A., Guentzel, M.N., Zhong, G, Arulanandam, B.P.  The protective efficacy of chlamydial protease-like activity factor vaccination is dependent upon CD4+ T cells. Cell. Immuno. 242:110-117. 2007.

  • Rodriguez, A.R., Arulanandam, B.P., Hodara, V.L, McClure, H.M., Cobb, E.K., Salas, M.T., White, R. Murthy, K.K.  Influence of IL-15 on CD8+ natural killer cells in human immunodeficienct virus type 1 infected chimpanzees.  J. Gen. Virol. 88:641-651, 2007.

  • Murthy, A. K., Chambers, J.P., Meier, P.A. Zhong, G., Arulanandam, B.P.  Intranasal vaccination with a secreted chlamydial protein enhances resolution of genital Chlamydia muridarum infection, protects against oviduct pathology and is highly dependent upon endogenous IFN-g production.  Infect. Immuno. 75:666-676. 2007.

Edwin Barea-Rodriguez, PH.D  Top

  • Gonzalez, L., Bustamante, J.J., Barea-Rodriguez, E.J., Martinez, A.O., and Haro, L. (2006). 2D native-page/SDS-page visualization of an oligomer's subunits:  Application to the analysis of IgG. Electrophoresis, 27, 2016-2023. 

  • Villarreal, J.S. and Barea-Rodriguez, E.J. (2006). ERK phosphorylation is required for retention of trace      fear memory.  Neurobiology of Learning and Memory, 85, 44-57.

  • Reddypalli S, Roll K, Lee HK, Lundell M, Barea-Rodriguez EJ, Wheeler EF. p75NTR-mediated signaling promotes the survival of myoblasts and influences muscle strength. J Cell Physiol. 2005 Sep;204(3):819-29.

  • Chirwa S, Aduonum A, Pizarro J, Reasor J, Kawai Y, Gonzalez M, McAdory BS, Onaivi E, Barea-Rodriguez EJ. Dopaminergic DA1 signaling couples growth-associated protein-43 and long-term potentiation in guinea pig hippocampus. Brain Res Bull. 2005 Jan 15;64(5):433-40.

  • Villarreal JS, Dykes JR, Barea-Rodriguez EJ. Fischer 344 rats display age-related memory deficits in trace fear conditioning. Behav Neurosci. 2004 Dec;118(6):1166-75.

James Chambers  Top

  • Murthy AK, Chambers JP, Meier PA, Zhong G, Arulanandam BP. Intranasal vaccination with a secreted chlamydial protein enhances resolution of genital Chlamydia muridarum infection, protects against oviduct pathology, and is highly dependent upon endogenous gamma interferon production. Infect Immun. 2007 Feb;75(2):666-76.

  • Daum LT, Canas LC, Klimov AI, Shaw MW, Gibbons RV, Shrestha SK, Myint KS, Acharya RP, Rimal N, Reese F, Niemeyer DM, Arulanandam BP, Chambers JP. Molecular analysis of isolates from influenza B outbreaks in the U.S. and Nepal, 2005. Arch Virol. 2006 Sep;151(9):1863-74.

  • Daum LT, Shaw MW, Klimov AI, Canas LC, Macias EA, Niemeyer D, Chambers JP, Renthal R, Shrestha SK, Acharya RP, Huzdar SP, Rimal N, Myint KS, Gould P. Related Articles, Links Free Full Text Influenza A (H3N2) outbreak, Nepal. Emerg Infect Dis. 2005 Aug;11(8):1186-91.

  • Daum LT, Ye K, Chambers JP, Santiago J, Hickman JR, Barnes WJ, Kruzelock RP, Atchley DH. Related Articles, Links Abstract Comparison of TaqMan and Epoch Dark Quenchers during real-time reverse transcription PCR. Mol Cell Probes. 2004 Jun;18(3):207-9.

Brenda Claiborne  Top

  • O'Boyle, M.P., V. Do, B.E. Derrick, and B.J. Claiborne (2004) In vivo recordings of long-term potentiation and long-term depression in the dentate gyrus of the neonatal rat. Journal of Neurophysiology, 91: 613-622.

  • Garza-Meilandt, A., R.E. Cantu, and B.J. Claiborne (2006) Estradiol’s effects on learning and neuronal morphology vary with route of administration. Behavioral Neuroscience, 120: 905-916.

  • Moskal, J.R., R.A. Kroes, N.J. Otto, O. Rahimi, and B.J. Claiborne (2006) Distinct patterns of gene expression in the left and right hippocampal formation of developing rats. Hippocampus, 16: 629-634

  • Rahimi, O., R.A. Froes, R.B. Goertz, R.E. Cantu, J.R. Moskal, and B.J. Claiborne (2006) Reduction of synaptic activity differentially affects gene expression patterns in right and left hippocampi of developing rats. Society for Neuroscience Abstracts, #216.7.

  • Rahimi, O., and B.J. Claiborne. Morphological development and maturation of granule neuron dendrites in the rat dentate gyrus. To be published in The Dentate Gyrus (H. Scharfmann, ed) Elsevier, London, U.K.

Waldemar Gorski  Top

  • Zhang, M.; Mullens, C.; Gorski, W., Coimmobilization of Dehydrogenases and Their Cofactors in Electrochemical Biosensors. Analytical Chemistry, 2007, 79, 2446-2450.

  • Sorunmu, Y. E.; Nguyen, M.; Sapp, J. B.; Gorski, W.; Phan, T. D.; Wei, X., Electrochemical and Spectroscopic Studies of Factors Affecting Molecular Behavior in Phenothiazine-Mediated Biosensing. Electroanalysis, 2006, 18, 2375-2380.

  • Zhu, S.; Gorski, W.; Powell, D. R.; Walmsley, J. A., Synthesis, Structures, and Electrochemistry of Au(III)-ethylenediamine Complexes and Their Interaction with Guaniosine 5�-Monophosphate. Inorganic Chemistry, 2006, 45, 2688-2694.

  • Zhang, M.; Mullens, C.; Gorski, W., Amperometric Glutamate Biosensor Based on Chitosan Enzyme Film. Electrochimica Acta, 2006, 51, 4528-4532.

  • Zhang, M.; Mullens, C.; Gorski, W. "Chitosan-Glutamate Oxidase Gels: Synthesis, Characterization, and Glutamate Determination". Electroanalysis, 2005, 17, 2114-2120.

Hyunsoo Han  Top

  • Singh, O. V.; Han, H. Iridium(I)-catalyzed regio- and enantioselective decarboxylative allylic amidation of substituted allyl benzyl imidodicarbonates. Journal of American Chemical Society 2007, 129, 774-775.

  • Singh, S.; Das, G.; Singh, O. V.; Han, H. Development of more potent 4-dimethylaminopyridine analogues. Organic. Letters 2007, 9, 401-404.

  • Singh, S.; Das, G.; Singh, O. V.; Han, H. Conformationally restricted 4-dimethylaminopyridine (DMAP) analogs: Synthesis and evaluation of catalytic effectiveness. Tetrahedron Letters 2007, 48, 1983-1986.

  • Singh, O. V.; Han, H. Stereoselective synthesis of trans-olefins by the copper-mediated SN2' reaction of vinyl oxazines with Grignard reagents. Asymmetric synthesis of D-threo-sphingosines. Tetrahedron Letters 2007, 48, 2345-2348.

  • Chikkanna, D.; Singh, O. V.; Kong, S. B.; Han, H. A General Asymmetric Route for the Synthesis of the Alexine and Australine Family of Pyrrolizidine Alkaloids.  The First Asymmetric Synthesis of 1,2-diepi-Alexine and 1,2,7-triepi-Australine. Tetrahedron Letters 2005, 46, 8865-8868.

George Negrete  Top

  • Mathew P.D. Mahindaratne, Brian A. Quiñones, Antonio Recio III, Erik A. Rodriguez, Frederick J. Lakner, and George R. Negrete ³Concentration, Temperature, and Salt Effects on an Auxiliary-Mediated, Aqueous Diels-Alder Reaction² Tetrahedron 2005, 61, 9495-9501.

  • Mathew P.D. Mahindaratne, Brian A. Quiñones, Antonio Recio III, Erik A. Rodriguez, Frederick J. Lakner, and George R. Negrete ³A Fully-Telescoped Auxiliary-Mediated Asymmetric Diels-Alder Cycloaddition² ARKIVOC 2005 (vi), 321-328.

  • Ande Bao, William T. Phillips, George R. Negrete, Robert Klipper, Beth A. Goins ³A Novel Liposome Radiolabeling Method Using Tc-99m-"SNS/S"  Complexes: In Vitro and In Vivo Evaluation² J. Pharma. Sci. 2003, 92, 1893-1904.

  • Mathew P.D. Mahindaratne, Hesham Fahmy, Jesus A. Garcia and George R. Negrete ³Stereoselective Preparations of Cis- and Trans-7-chloro-7,8,9,10-tetrahydrobenzo[a]pyren-8-ol: Remarkable Solvent Effect on the Diastereoselectivity of Epoxide Opening² Synth. Commun. 2003, 1391-1398.

  • Frederick J. Lakner and George R. Negrete ³A New and Convenient Chiral Auxiliary for Asymmetric Diels-Alder Cycloadditions in Environmentally Benign Solvents² Synlett 2002, 643-645.

Garry Sunter    Top

  • Sunter, G. and Bisaro, D.M. (2003) Identification of a Minimal Sequence Required for Activation of Tomato Golden Mosaic Virus Coat Protein Promoter in Protoplasts. Virology, 305 (2): 452-462.

  • Hao, L., Wang, H., Sunter, G. and Bisaro, D.M. (2003) Geminivirus AL2 and L2 Proteins Interact and Inactivate SNF1 Kinase. Plant Cell. 15:1034-48.

  • Wang, H., Hao, L., Shung, C-Y., Sunter, G. and Bisaro, D.M. (2003) Geminivirus AL2 and L2 proteins interact with and Inactivate Adenosine Kinase. The Plant Cell, 15: 1-14.

  • Baliji, S., Black, M.C., French, R., Stenger, D.C. and Sunter, G. (2004) Spinach Curly Top Virus: A Newly Described Curtovirus Species from Southwest Texas with Incongruent Gene Phylogenies. Phytopathology 94: 772-779.

  • Hong, S.H., Kim, K.I., Chung, H.Y., Kim, Y.J., Sunter, G., Bisaro, D.M. and Chung, I.S. (2004) Expression of recombinant endostatin in Agrobacterium-inoculated leaf disks of Nicotiana tabacum var. xanthi. Biotechnology Letters, 26(18): 1433-9.

Brian Derrick  Top

  • Davis, C, Jones, F. and Derrick, BE. (2004) Novelty Enhances the Induction and Maintenance of LTP in the in the Dentate Gyrus.  J. Neuroscience 29: 6497- 507.

  • Villarreal, D., Do, V. Haddad, E, and Derrick, B.E. (2002)  NMDA antagonists sustain LTP and Spatial Memory: Evidence for Active processes Underlying LTP Decay.  Nat. Neurosci. 5: 48-52.

  • Do, V., Martinez, CO, and  Derrick, B.E. (2002) Long-term  Potentiation in direct perforant path projections to hippocampal area CA3 in vivo.  J. Neurophys. 87: 669-674.

  • Derrick, B.E. and  J.L. Martinez, Jr.  (1996)  Associative bidirectional modifications at the  mossy fiber synapse.  Nature  381:429-434.

  • Derrick, B.E. and J.L. Martinez, Jr. (1994) Opioid receptors underlie the frequency-dependence of mossy fiber LTP induction. J. Neurosci. 14 (7): 4359-67.

Robert Renthal  Top

  • Nannepaga, S.J., Gawalapu, R., Velsaquez, D. & Renthal, R.  “Estimation of helix-helix association free energy from partial unfolding of bacterioopsin.” Biochemistry 43, 550-559 (2004)

  •  R. Renthal,  “Discovering pheromones of the red imported fire ant (Solenopsis invicta Buren): A review of and proposed new target for pheromone disruption”;  Journal of Agricultural and Urban Entomology, 20, 113-121 (2004)

  •  K.V.P. Guntur, D. Velasquez, L. Chadwell, C.A. Carroll, S.T. Weintraub, J.A. Cassill & R. Renthal, “Apolipophorin-III-like protein expressed in the antenna of the red imported fire ant, Solenopsis invicta Buren (Hymenoptera: Formicidae)”; Arch. Insect Biochemistry and Physiology, 57, 101-110 (2004)

  •   L. T. Daum, M. W. Shaw, A. I. Klimov, L. C. Canas, E. A. Macias, D. Niemeyer, J. P. Chambers, R. Renthal, S. K. Shrestha, R. P. Acharya, S. P. Huzdar, N. Rimal, K. S. Myint, and P. Gould, "Influenza A (H3N2) Outbreak, Nepal," Emerging Infectious Diseases 11, 1186-1191 (2005)

  •  Valluru, N., Silva, F., Dhage, M., Rodriguez, G., Alloor, S.R. & Renthal, R. “Transmembrane helix-helix association: relative stabilities at low pH.” Biochemistry 45, 4371-4377 (2006)

Dibyendu Sarkar   Top

  • Sarkar, D., M.C. Ferguson, R. Datta, and S. Birnbaum. (2005) Bioremediation of petroleum hydrocarbons in contaminated soils: Comparison of biosolids addition, carbon supplementation, and monitored natural attenuation. Environ. Pollution. 136: 187-195.

  • Sarkar, D., R. Datta, and S. Sharma. (2005) Fate and bioavailability of arsenic in organo-arsenical pesticide applied soils. Part-I. Incubation Study. Chemosphere, 60: 188-195.

  • Makris, K.C., D. Sarkar., and R. Datta (2006) Aluminum-Based Drinking-Water Treatment Residuals: A Novel Sorbent for Perchlorate Removal. Environ Pollution. 140: 9-12.

  • Israr, M., S. Sahi, R. Datta, and D. Sarkar (2006) Bioaccumulation and physiological effects of mercury in Sesbania drummondii (IN PRESS – available via web: Chemosphere).

  • Makris, K.C., D. Sarkar., and R. Datta (2006) Evaluating a waste by-product as a novel sorbent for As(V) and As(III) (IN PRESS – available via web: Chemosphere).

Andrew Tsin  Top

  • FORMTEXT Vogt, R., Unda,R., L.C. Yeh, E. Vidro*, J.C. Lee and Tsin, A.T.C.  Bone Morphogenetic Protein -4 Enhances Vascular Endothelial Growth Factor Secretion by Human Retinal Pigment Epithelial Cells. Journal of Cellular Biochemistry 98: 1196-1202, 2006.

  • Villazana-Espinoza, E. Harch, A. and Tsin, A.T.C.  Effect of light exposure on accumulation  depletion of retinyl ester in the chicken retina.  Experimental Eye Research. 83: 871-876, 2006.

  • Muniz, A. Villazana-Espinoza, E., Thackeray, B. and Tsin, A.T.C.  11-cis ARAT Activity in Primary Culture of Chicken Muller Cells.  Biochemistry, 45: 12265-73, 2006. 

  • Heimsath, E.G., Unda, R., Vidro, E., Muniz, A., Villazana-Espinoza, E. and Tsin, A.T.C. ARPE-19 Cell Growth and Cell Functions in a Euglycemic Culture Media.  Current Eye Research, 31: 1073-1080, 2006.

  • Sardar, D.K., Swanland, G-Y., Yow, R. M., Thomas, R. J. amd Tsin, A.T.C.  Optical properties of ocular tissues in the neear infrared region;  Lasers in Medical Sciences, 10: 10103-10110, 2007.

Judith Walmsley  Top

  • Zhu, S.; Gorski, W.; Powell, D. R.; Walmsley, J. A., Synthesis, Structures, and Electrochemistry of Au(III)-Ethylenediamine Complexes and their Interaction with Guanosine 5'-Monophosphate. Inorganic Chemistry, 2006, 45, 26882694.

  • Adrian, R. A.; Zhu, S.; Daniels, L. M.; Tiekink, E. R. T. ; Walmsley, J. A., [1,2Bis(diphenylphosphino)ethane] dinitratopalladium(II), Acta Crystallographica, Se,ction E 2006, E62, m1422-1424.

  • Bach S. B. H., Sepeda, T. G., Merrill, G., Walmsley, J. A., Complexes of Dibromo(ethylenediamine)palladium(II) Observed from Aqueous Solutions by Electrospray Mass Spectrometry”. Journal of the American Society for Mass Spectrometry, 2005, 16, 1461-1469.

  • Zhu, S;, Matilla, A.; Tercero, J. M.; Vijayaragavan, V.; Walmsley, J. A., Binding of Palladium(II) Complexes to Guanine, Guanosine or Guanosine 5'-Monophosphate in Aqueous Solution: Potentiometric and NMR studies. Inorganica Chimica Acta, 2004, 357, 411-420.

  • Walmsley, J. A.; Burnett, J. F., A New Model for the K+ Induced Macromolecular Structure of Guanosine 5'-Monophosphate in Solution. Biochemistry, 1999, 42, 14063-14068.

Cong-Gui Zhao  Top

  • Adam, W.; Zhao, C.-G.* “Chapter IV. 2.1.2 Dioxirane”, in Wiley Handbook of CH Oxidations; Dyker, G. Ed, Wiley-VCH:Weinheim, Vol. 2, 2005, pp. 507-516.

  • Adam, W.; Zhao, C.-G.* “Chapter 16. Contemporary Dioxirane Chemistry: Epoxidations, Heteroatom Oxidations and CH Insertions”, in The Chemistry of Peroxides Rappoport, Z. Ed, Wiley:Chichester, Vol. 2, 2006, pp. 1129-1170.

  • Samanta, S.; Zhao, C.-G.* ''Asymmetric Direct Aldol Reaction of 1,2-Ketones and Ketones Mediated by Proline Derivatives'' Tetrahedron Lett., 2006, 47, 3383-3386.

  • Samanta, S.; Zhao, C.-G.* “Organocatalytic Enantioselective Synthesis of α-HydroxyPhosphonates” J. Am. Chem. Soc., 2006, 128, 7442-7443.

  • Jakka, K.; Zhao, C.-G.* “Highly Enantioselective CH Oxidation of vic-Diols with Shi’s Oxazolidinone Dioxiranes” Org. Lett., 2006, 8, in press.

Liao Y Chen  Top

  • Chen, L. Y. and Nash, P. L. Path integral approach to Brownian motion driven with an ac driving force, Journal of Chemical Physics, 121, 3984 (2004).

  • Chen, L. Y. and Nash, P. L. Transient response of a Brownian particle with general damping, Journal of Chemical Physics, 120, 3348 (2004).

  • Nash, P. L. and Chen, L. Y. Factorization of the constants of the motion, Canadian Journal of Physics, accepted for publication (2006).

  • Chen, L. Y. and Horing, N. J. M.,Transition rate prefactors for systems of many degrees of freedom, Journal of Chemical Physics, 124, 164102 (2006).

  • Chen, L. Y. Nash, P. L. and Horing, N. J. M. Efficient transition path sampling for systems with multiple reaction pathways, Journal of Chemical Physics, 123, 094104 (2005).

Hai-Chao Han  Top

  • Han HC, Lerakis S (2004). The relation between viable segments and the left ventricular ejection fraction improvement. J Med Eng Technol 28(6): 242-253.

  • Han HC, Martin RP, Lerakis G, Lerakis S, (2005). Prediction of the left ventricular ejection fraction improvement using echocardiography and mechanical modeling. J Am Society of Echocardiography18(7): 718-721.

  • Davis NP, Han HC, Wayman B, Vito RP (2005). Sustained axial loading lengthens arteries in organculture. Ann Biomed Eng. 33(7): 869-879.

  • Han HC, Marita S, Ku DN (2006), Changes of opening angle in hypertensive and hypotensive arteries inthree-day organ culture. J Biomech (In press).

  • Challa V, Han HC (2006). Spatial variations in wall thickness, material stiffness, and initial shape affectwall stress and shape of intracranial aneurysms. Submitted to Neurol Res.

Luis Haro  Top

  • Sanchez, D.L., Armstrong, L., Aguilar, R., Adrian, G.S., Haro, L. and Martinez, A.O. (2001) Haptoglobin Gene Expression in Human Glioblastoma Cell Lines. Neurosci. Lett. 303: 181-184.

  • Pizarro, J.M., Haro, L.S. and Barea-Rodriguez, E.J. (2003) Learning Associated Increase in Heat Shock Cognate 70 mRNA and Protein Expression. Neurobiol. Learn. Mem. 79:142-51.

  • Grigorian, A. L., Bustamante, J.J., Hernandez, P., Martinez, A.O. and Haro, L.S. (2005) Extraordinarily Stable Disulfide-Linked Homodimer of Human Growth Hormone. Protein Sci. 14: 902-913.

  • Bustamante, J.J., Garcia, M., Gonzalez, L., Garcia, J., Flores, R., Aguilar, R., Trevino, A., Benavides, L., Martinez, A.O. and Haro, L.S. (2005) Separation of Proteins with a Molecular Weight Difference of 2 Kilodaltons Utilizing Preparative Double-Inverted Gradient Polyacrylamide Gel Electrophoresis Under Non-reducing Conditions: Application to the Isolation of 24 kDa Glycosylated Human Growth Hormone. Electrophoresis 26: 4389-4395.

  • Gonzalez, L., Bustamante, J.J., Barea-Rodriguez, E.J., Martinez, A.O. and Haro, L.S. (2006) 2D Native PAGE/SDS-PAGE Visualization of an Oligomer’s Subunits: Application to the Analysis of IgG. Electrophoresis 27: 2016-2023.

 

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