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Running MEME Systems

While MEME is available via a web interface, it does not take advantage of the parallel processing capabilities when integrated with MPI. To run MEME on the cluster, use the following as an example job script:

 

In the case you need to pass options to mpirun, use quotes after the '-p' option to include those options:
/share/apps/meme/bin/meme -p "$NSLOTS mpiOptions" ...