Publications


The following publications have resulted from use of the Genomics Core facility.

Suzuki S, Diaz VD, Hermann BP. What has single-cell RNA-seq taught us about mammalian spermatogenesis? Biol Reprod. 2019 May 11. [Epub ahead of print]
PMID:31077285 | DOI:10.1093/biolre/ioz088


Velte EK, Niedenberger BA, Serra ND, Singh A, Roa-DeLaCruz L, Hermann BP, Geyer CB. Differential RA responsiveness directs formation of functionally distinct spermatogonial populations at the initiation of spermatogenesis in the mouse. Development. 2019 May 13;146(12).
PMID:31023878 | PMCID:PMC6602341 | DOI:10.1242/dev.173088


Hale BJ, Fernandez RF, Kim SQ, Diaz VD, Jackson SN, Liu L, Brenna JT, Hermann BP, Geyer CB, Ellis JM. Acyl-CoA Synthetase 6 enriches seminiferous tubules with the omega-3 fatty acid DHA and is required for male fertility in the mouse. J Biol Chem. 2019 Aug 9. [Epub ahead of print]
PMID:31399511 | PMCID:PMC6768642 | DOI:10.1074/jbc.RA119.009972


Mueller KD, Zhang H, Serrano CR, Billmyre RB, Huh EY, Wiemann P, Keller NP, Wang Y, Heitman J, Lee SC. Gastrointestinal microbiota alteration induced by Mucor circinelloides in a murine model. J Microbiol. 2019 Jun;57(6):509-520. Epub 2019 May 27.
PMID:31012059 | PMCID:PMC6737537 | DOI:10.1007/s12275-019-8682-x


Brian P. Hermann, Keren Cheng, Anukriti Singh, Lorena Roa-De La Cruz, Kazadi N. Mutoji, I-Chung Chen, Heidi Gildersleeve, Jake D. Lehle, Max Mayo, Birgit Westernströer, Nathan C. Law, Melissa J. Oatley, Ellen K. Velte, Bryan A. Niedenberger, Danielle Fritze, Sherman Silber, Christopher B. Geyer, Jon M. Oatley, John R. McCarrey. The Mammalian Spermatogenesis Single-Cell Transcriptome, from Spermatogonial Stem Cells to Spermatids. Cell Rep. 2018 Nov 6;25(6):1650-1667.e8.
PMID:30404016 | PMCID:PMC6384825 | DOI:10.1016/j.celrep.2018.10.026


Mutoji KN, Singh A, Nguyen T, Gildersleeve H, Kaucher AV, Oatley MJ, Oatley JM, Velte EK, Geyer CB, Cheng K, McCarrey JR and Hermann BP. TSPAN8 Expression Distinguishes Spermatogonial Stem Cells in the Prepubertal Mouse Testis. Biol Reprod. 2016 Dec; 95(6):117.
PMID:27733379 | PMCID:PMC5315423 | DOI:10.1095/biolreprod.116.144220


Wechsler ME*, Hermann BP, and Bizios R. Adult Human Mesenchymal Stem Cell Differentiation at the Cell Population and Single-Cell Levels Under Alternating Electric Current. Tissue Engineering Part C: Methods. Feb 2016, 22(2). (*undergraduate)
PMID:26573771 | PMCID:PMC4744881 | DOI:10.1089/ten.tec.2015.0324


Hermann BP*, Mutoji KN, Velte EK, Ko D, Oatley JM, Geyer CB, and McCarrey JR. Transcriptional and Translational Heterogeneity among Neonatal Mouse Spermatogonia. Biol Reprod. 2015 Feb; 92(2):54. Accompanied by a commentary. (*corresponding author)
PMID:25568304 | PMCID:PMC4342790 | DOI:10.1095/biolreprod.114.125757


Benavides-Garcia R*, Joachim R*, Pina N, Mutoji KN, Reilly M, and Hermann BP. Granulocyte colony-stimulating factor prevents loss of spermatogenesis after sterilizing busulfan chemotherapy. Fertil Steril. 2015 Jan; 103(1):270-80.e8. (*equal contribution, both undergraduate)
PMID:25439845 | PMCID:PMC4282609 | DOI:10.1016/j.fertnstert.2014.09.023

Genome Announcements

Allué-Guardia A, Nyong EC, Koenig SSK, Vargas SM, Bono JL, Eppinger M. 2019. Closed Genome Sequence of Escherichia coli K-12 Group Strain C600. Microbiol Resour Announc. 2019 Jan 10;8(2).
PMID:30643872 | PMCID:PMC6328645 | DOI:10.1128/MRA.01052-18


Lopez LL, Rusconi B, Gildersleeve H, Qi C, McLaughlin M, Scheetz MH, Seshu J, Eppinger M. Genome Sequences of Five Clinical Isolates of Klebsiella pneumoniae. Genome Announc. 2016 Mar 10;4(2), e00040-16.
PMID:26966211 | PMCID:PMC4786646 | DOI:10.1128/genomeA.00040-16

 


Acknowledgements

Each publication, press release, or other documentation must acknowledge research supported by the UTSA Genomics Core with the following statement:
Results were generated in part with help from the UTSA Genomics Core which is supported by NIH grant G12-MD007591, NSF grant DBI-1337513 and UTSA.